FM / matplotlib

/usr/lib64/python2.6/site-packages/matplotlib/

/usr/lib64/python2.6/site-packages/matplotlib

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Edit: /usr/lib64/python2.6/site-packages/matplotlib/scale.py (14233B)

import textwrap
import numpy as np
from numpy import ma
MaskedArray = ma.MaskedArray

from cbook import dedent
from ticker import NullFormatter, ScalarFormatter, LogFormatterMathtext, Formatter
from ticker import NullLocator, LogLocator, AutoLocator, SymmetricalLogLocator, FixedLocator
from transforms import Transform, IdentityTransform

class ScaleBase(object):
    """
    The base class for all scales.

Scales are separable transformations, working on a single dimension.

Any subclasses will want to override:

- :attr:`name`
      - :meth:`get_transform`

And optionally:
      - :meth:`set_default_locators_and_formatters`
      - :meth:`limit_range_for_scale`
    """
    def get_transform(self):
        """
        Return the :class:`~matplotlib.transforms.Transform` object
        associated with this scale.
        """
        raise NotImplementedError

def set_default_locators_and_formatters(self, axis):
        """
        Set the :class:`~matplotlib.ticker.Locator` and
        :class:`~matplotlib.ticker.Formatter` objects on the given
        axis to match this scale.
        """
        raise NotImplementedError

def limit_range_for_scale(self, vmin, vmax, minpos):
        """
        Returns the range *vmin*, *vmax*, possibly limited to the
        domain supported by this scale.

*minpos* should be the minimum positive value in the data.
         This is used by log scales to determine a minimum value.
        """
        return vmin, vmax

class LinearScale(ScaleBase):
    """
    The default linear scale.
    """

name = 'linear'

def __init__(self, axis, **kwargs):
        pass

def set_default_locators_and_formatters(self, axis):
        """
        Set the locators and formatters to reasonable defaults for
        linear scaling.
        """
        axis.set_major_locator(AutoLocator())
        axis.set_major_formatter(ScalarFormatter())
        axis.set_minor_locator(NullLocator())
        axis.set_minor_formatter(NullFormatter())

def get_transform(self):
        """
        The transform for linear scaling is just the
        :class:`~matplotlib.transforms.IdentityTransform`.
        """
        return IdentityTransform()

def _mask_non_positives(a):
    """
    Return a Numpy masked array where all non-positive values are
    masked.  If there are no non-positive values, the original array
    is returned.
    """
    mask = a <= 0.0
    if mask.any():
        return ma.MaskedArray(a, mask=mask)
    return a

def _clip_non_positives(a):
    a[a <= 0.0] = 1e-300
    return a

class LogScale(ScaleBase):
    """
    A standard logarithmic scale.  Care is taken so non-positive
    values are not plotted.

For computational efficiency (to push as much as possible to Numpy
    C code in the common cases), this scale provides different
    transforms depending on the base of the logarithm:

- base 10 (:class:`Log10Transform`)
       - base 2 (:class:`Log2Transform`)
       - base e (:class:`NaturalLogTransform`)
       - arbitrary base (:class:`LogTransform`)
    """

name = 'log'

class LogTransformBase(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True

def __init__(self, nonpos):
            Transform.__init__(self)
            if nonpos == 'mask':
                self._handle_nonpos = _mask_non_positives
            else:
                self._handle_nonpos = _clip_non_positives

class Log10Transform(LogTransformBase):
        base = 10.0

def transform(self, a):
            a = self._handle_nonpos(a * 10.0)
            if isinstance(a, MaskedArray):
                return ma.log10(a)
            return np.log10(a)

def inverted(self):
            return LogScale.InvertedLog10Transform()

class InvertedLog10Transform(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True
        base = 10.0

def transform(self, a):
            return ma.power(10.0, a) / 10.0

def inverted(self):
            return LogScale.Log10Transform()

class Log2Transform(LogTransformBase):
        base = 2.0

def transform(self, a):
            a = self._handle_nonpos(a * 2.0)
            if isinstance(a, MaskedArray):
                return ma.log(a) / np.log(2)
            return np.log2(a)

def inverted(self):
            return LogScale.InvertedLog2Transform()

class InvertedLog2Transform(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True
        base = 2.0

def transform(self, a):
            return ma.power(2.0, a) / 2.0

def inverted(self):
            return LogScale.Log2Transform()

class NaturalLogTransform(LogTransformBase):
        base = np.e

def transform(self, a):
            a = self._handle_nonpos(a * np.e)
            if isinstance(a, MaskedArray):
                return ma.log(a)
            return np.log(a)

def inverted(self):
            return LogScale.InvertedNaturalLogTransform()

class InvertedNaturalLogTransform(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True
        base = np.e

def transform(self, a):
            return ma.power(np.e, a) / np.e

def inverted(self):
            return LogScale.NaturalLogTransform()

class LogTransform(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True

def __init__(self, base, nonpos):
            Transform.__init__(self)
            self.base = base
            if nonpos == 'mask':
                self._handle_nonpos = _mask_non_positives
            else:
                self._handle_nonpos = _clip_non_positives

def transform(self, a):
            a = self._handle_nonpos(a * self.base)
            if isinstance(a, MaskedArray):
                return ma.log(a) / np.log(self.base)
            return np.log(a) / np.log(self.base)

def inverted(self):
            return LogScale.InvertedLogTransform(self.base)

class InvertedLogTransform(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True

def __init__(self, base):
            Transform.__init__(self)
            self.base = base

def transform(self, a):
            return ma.power(self.base, a) / self.base

def inverted(self):
            return LogScale.LogTransform(self.base)

def __init__(self, axis, **kwargs):
        """
        *basex*/*basey*:
           The base of the logarithm

*nonposx*/*nonposy*: ['mask' | 'clip' ]
          non-positive values in *x* or *y* can be masked as
          invalid, or clipped to a very small positive number

*subsx*/*subsy*:
           Where to place the subticks between each major tick.
           Should be a sequence of integers.  For example, in a log10
           scale: ``[0, 1, 2, 3, 4, 5, 6, 7, 8, 9]``

will place 10 logarithmically spaced minor ticks between
           each major tick.
        """
        if axis.axis_name == 'x':
            base = kwargs.pop('basex', 10.0)
            subs = kwargs.pop('subsx', None)
            nonpos = kwargs.pop('nonposx', 'mask')
        else:
            base = kwargs.pop('basey', 10.0)
            subs = kwargs.pop('subsy', None)
            nonpos = kwargs.pop('nonposy', 'mask')

if nonpos not in ['mask', 'clip']:
            raise ValueError("nonposx, nonposy kwarg must be 'mask' or 'clip'")

if base == 10.0:
            self._transform = self.Log10Transform(nonpos)
        elif base == 2.0:
            self._transform = self.Log2Transform(nonpos)
        elif base == np.e:
            self._transform = self.NaturalLogTransform(nonpos)
        else:
            self._transform = self.LogTransform(base, nonpos)

self.base = base
        self.subs = subs

def set_default_locators_and_formatters(self, axis):
        """
        Set the locators and formatters to specialized versions for
        log scaling.
        """
        axis.set_major_locator(LogLocator(self.base))
        axis.set_major_formatter(LogFormatterMathtext(self.base))
        axis.set_minor_locator(LogLocator(self.base, self.subs))
        axis.set_minor_formatter(NullFormatter())

def get_transform(self):
        """
        Return a :class:`~matplotlib.transforms.Transform` instance
        appropriate for the given logarithm base.
        """
        return self._transform

def limit_range_for_scale(self, vmin, vmax, minpos):
        """
        Limit the domain to positive values.
        """
        return (vmin <= 0.0 and minpos or vmin,
                vmax <= 0.0 and minpos or vmax)

class SymmetricalLogScale(ScaleBase):
    """
    The symmetrical logarithmic scale is logarithmic in both the
    positive and negative directions from the origin.

Since the values close to zero tend toward infinity, there is a
    need to have a range around zero that is linear.  The parameter
    *linthresh* allows the user to specify the size of this range
    (-*linthresh*, *linthresh*).
    """
    name = 'symlog'

class SymmetricalLogTransform(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True

def __init__(self, base, linthresh):
            Transform.__init__(self)
            self.base = base
            self.linthresh = linthresh
            self._log_base = np.log(base)
            self._linadjust = (np.log(linthresh) / self._log_base) / linthresh

def transform(self, a):
            a = np.asarray(a)
            sign = np.sign(a)
            masked = ma.masked_inside(a, -self.linthresh, self.linthresh, copy=False)
            log = sign * ma.log(np.abs(masked)) / self._log_base
            if masked.mask.any():
                return np.asarray(ma.where(masked.mask,
                                            a * self._linadjust,
                                            log))
            else:
                return np.asarray(log)

def inverted(self):
            return SymmetricalLogScale.InvertedSymmetricalLogTransform(self.base, self.linthresh)

class InvertedSymmetricalLogTransform(Transform):
        input_dims = 1
        output_dims = 1
        is_separable = True

def __init__(self, base, linthresh):
            Transform.__init__(self)
            self.base = base
            self.linthresh = linthresh
            self._log_base = np.log(base)
            self._log_linthresh = np.log(linthresh) / self._log_base
            self._linadjust = linthresh / (np.log(linthresh) / self._log_base)

def transform(self, a):
            a = np.asarray(a)
            return np.where(a <= self._log_linthresh,
                             np.where(a >= -self._log_linthresh,
                                       a * self._linadjust,
                                       -(np.power(self.base, -a))),
                             np.power(self.base, a))

def inverted(self):
            return SymmetricalLogScale.SymmetricalLogTransform(self.base)

def __init__(self, axis, **kwargs):
        """
        *basex*/*basey*:
           The base of the logarithm

*linthreshx*/*linthreshy*:
          The range (-*x*, *x*) within which the plot is linear (to
          avoid having the plot go to infinity around zero).

will place 10 logarithmically spaced minor ticks between
           each major tick.
        """
        if axis.axis_name == 'x':
            base = kwargs.pop('basex', 10.0)
            linthresh = kwargs.pop('linthreshx', 2.0)
            subs = kwargs.pop('subsx', None)
        else:
            base = kwargs.pop('basey', 10.0)
            linthresh = kwargs.pop('linthreshy', 2.0)
            subs = kwargs.pop('subsy', None)

self._transform = self.SymmetricalLogTransform(base, linthresh)

self.base = base
        self.linthresh = linthresh
        self.subs = subs

def set_default_locators_and_formatters(self, axis):
        """
        Set the locators and formatters to specialized versions for
        symmetrical log scaling.
        """
        axis.set_major_locator(SymmetricalLogLocator(self.get_transform()))
        axis.set_major_formatter(LogFormatterMathtext(self.base))
        axis.set_minor_locator(SymmetricalLogLocator(self.get_transform(), self.subs))
        axis.set_minor_formatter(NullFormatter())

def get_transform(self):
        """
        Return a :class:`SymmetricalLogTransform` instance.
        """
        return self._transform

_scale_mapping = {
    'linear'            : LinearScale,
    'log'               : LogScale,
    'symlog'            : SymmetricalLogScale
    }
def get_scale_names():
    names = _scale_mapping.keys()
    names.sort()
    return names

def scale_factory(scale, axis, **kwargs):
    """
    Return a scale class by name.

ACCEPTS: [ %(names)s ]
    """
    scale = scale.lower()
    if scale is None:
        scale = 'linear'

if scale not in _scale_mapping:
        raise ValueError("Unknown scale type '%s'" % scale)

return _scale_mapping[scale](axis, **kwargs)
scale_factory.__doc__ = dedent(scale_factory.__doc__) % \
    {'names': " | ".join(get_scale_names())}

def register_scale(scale_class):
    """
    Register a new kind of scale.

*scale_class* must be a subclass of :class:`ScaleBase`.
    """
    _scale_mapping[scale_class.name] = scale_class

def get_scale_docs():
    """
    Helper function for generating docstrings related to scales.
    """
    docs = []
    for name in get_scale_names():
        scale_class = _scale_mapping[name]
        docs.append("    '%s'" % name)
        docs.append("")
        class_docs = dedent(scale_class.__init__.__doc__)
        class_docs = "".join(["        %s\n" %
                              x for x in class_docs.split("\n")])
        docs.append(class_docs)
        docs.append("")
    return "\n".join(docs)

cmd: